The soil microbiome at the Gi-FACE experiment responds to a moisture gradient but not to CO2 enrichment

De Menezes, AB; Müller, C; Clipson, N; Doyle, E

Abstract

The soil bacterial community at the Giessen free-air CO2 enrichment (Gi-FACE) experiment was analysed by tag-sequencing of the 16S rRNA gene. No substantial effects of CO2 levels on bacterial community composition were detected. However, the soil moisture gradient at Gi-FACE had a significant effect on bacterial community composition. Different groups within the Acidobacteria and Verrucomicrobia phyla were affected differently by soil moisture content. These results suggest that modest increases in atmospheric CO2 may cause only minor changes in soil bacterial community composition and indicate that the functional responses of the soil community to CO2 enrichment previously reported at Gi-FACE are due to other factors other than changes in bacterial community composition. These results suggest that modest increases in atmospheric CO2 may cause only minor changes in soil bacterial community composition and indicate that the soil functional responses to CO2 enrichment previously reported at Gi-FACE are due to factors other than changes in bacterial community composition. The effects of the moisture gradient revealed new information about the relationships between poorly known Acidobacteria and Verrucomicrobia and soil moisture content. This study contrasts with the relatively small number of other temperate grassland FACE microbiome studies in the use of moderate CO2 enrichment and the resulting minor changes in the soil microbiome. Thus, it will facilitate the development of further climate change mitigation studies. In addition, the moisture gradient found at Gi-FACE contributes new to knowledge in soil microbial ecology, particularly regarding the abundance and moisture relationships of the soil Verrucomicrobia.

Citation

De Menezes, A., Müller, C., Clipson, N., & Doyle, E. (2016). The soil microbiome at the Gi-FACE experiment responds to a moisture gradient but not to CO2 enrichment. Microbiology, 162, 1572-1582. https://doi.org/10.1099/mic.0.000341

• Journal Article Type: Article
• Acceptance Date: Jul 26, 2016
• Online Publication Date: Sep 1, 2016
• Publication Date: Sep 1, 2016
• Deposit Date: Aug 9, 2016
• Publicly Available Date: Sep 9, 2017
• Journal: Microbiology
• Print ISSN: 1350-0872
• Electronic ISSN: 1465-2080
• Publisher: Microbiology Society
• Volume: 162
• Pages: 1572-1582
• DOI: https://doi.org/10.1099/mic.0.000341
• Publisher URL: http://dx.doi.org/10.1099/mic.0.000341
• Related Public URLs: http://mic.microbiologyresearch.org/content/journal/micro