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All Outputs (36)

Resource competition drives an invasion‐replacement event among shrew species on an island (2023)
Journal Article
Browett, S., Synnott, R., O'Meara, D., Antwis, R., Browett, S., Bown, K., …McDevitt, A. (2023). Resource competition drives an invasion‐replacement event among shrew species on an island. Journal of Animal Ecology, https://doi.org/10.1111/1365-2656.13855

Invasive mammals are responsible for the majority of native species extinctions on islands. While most of these extinction events will be due to novel interactions between species (e.g. exotic predators and naive prey), it is more unusual to find inc... Read More about Resource competition drives an invasion‐replacement event among shrew species on an island.

Universal closed-tube barcoding for monitoring the shark and ray trade in megadiverse conservation hotspots (2022)
Journal Article
Prasetyo, A., Cusa, M., Murray, J., Agung, F., Muttaqin, E., Maraini, S., & McDevitt, A. (2022). Universal closed-tube barcoding for monitoring the shark and ray trade in megadiverse conservation hotspots. bioRxiv, https://doi.org/10.1101/2022.11.30.518468

Trade restrictions for many endangered elasmobranch species exist to disincentivise their exploitation and curb their declines. However, the variety of products and the complexity of import/export routes make trade monitoring challenging. We investig... Read More about Universal closed-tube barcoding for monitoring the shark and ray trade in megadiverse conservation hotspots.

UK DNA working group eDNA week, January 2022 (2022)
Journal Article
Handley, L. L., Blackwell, T., Broadhurst, H. A., Clark, K., Davison, P. I., England, J., …Creer, S. (2022). UK DNA working group eDNA week, January 2022. Environmental DNA, 5(1), 18-24. https://doi.org/10.1002/edn3.364

Here, we report on eDNA week, an international conference held online as a five‐day series of webinars from January 17, 2022, to January 21, 2022. The conference was organized by the UK DNA working group, which has witnessed considerable growth and a... Read More about UK DNA working group eDNA week, January 2022.

Molecular phylogeny and systematics of bald uakaris, genus Cacajao (Primates: Pitheciidae), with the description of a new species. (2022)
Journal Article
Ennes Silva, F., Valsecchi do Amaral, J., Roos, C., Bowler, M., Röhe, F., Sampaio, R., …Boubli, J. (2022). Molecular phylogeny and systematics of bald uakaris, genus Cacajao (Primates: Pitheciidae), with the description of a new species. Molecular Phylogenetics and Evolution, 173, https://doi.org/10.1016/j.ympev.2022.107509

Bald uakaris, genus Cacajao, are Amazonian primates currently classified as one species and four subspecies based on the patterns of pelage coloration. In this study, we test if their current taxonomy is represented by the phylogenetic relationship o... Read More about Molecular phylogeny and systematics of bald uakaris, genus Cacajao (Primates: Pitheciidae), with the description of a new species..

Next‐generation phylogeography resolves post‐glacial colonization patterns in a widespread carnivore, the red fox (Vulpes vulpes), in Europe (2021)
Journal Article
McDevitt, A., Coscia, I., Browett, S., Ruiz‐González, A., Statham, M., Ruczyńska, I., …Wójcik, J. (2022). Next‐generation phylogeography resolves post‐glacial colonization patterns in a widespread carnivore, the red fox (Vulpes vulpes), in Europe. Molecular Ecology, 31(3), 993-1006. https://doi.org/10.1111/mec.16276

Carnivores tend to exhibit a lack of (or less pronounced) genetic structure at continental scales in both a geographic and temporal sense and this can confound the identification of post-glacial colonization patterns in this group. In this study we u... Read More about Next‐generation phylogeography resolves post‐glacial colonization patterns in a widespread carnivore, the red fox (Vulpes vulpes), in Europe.

Mapping differences in mammalian distributions and diversity using environmental DNA from rivers (2021)
Journal Article
Broadhurst, H., Gregory, L., Bleakley, E., Perkins, J., Lavin, J., Bolton, P., …McDevitt, A. (2021). Mapping differences in mammalian distributions and diversity using environmental DNA from rivers. Science of the Total Environment, 801, 149724. https://doi.org/10.1016/j.scitotenv.2021.149724

Finding more efficient ways to monitor and estimate the diversity of mammalian communities is a major step towards their management and conservation. Environmental DNA (eDNA) from river water has recently been shown to be a viable method for biomonit... Read More about Mapping differences in mammalian distributions and diversity using environmental DNA from rivers.

Fungal microbiomes are determined by host phylogeny and exhibit widespread associations with the bacterial microbiome (2021)
Journal Article
Harrison, X., McDevitt, A., Dunn, J., Grifftihs, S., Benvenuto, C., Birtles, R., …Antwis, R. (2021). Fungal microbiomes are determined by host phylogeny and exhibit widespread associations with the bacterial microbiome. Proceedings of the Royal Society B: Biological Sciences, 288(1957), 20210552. https://doi.org/10.1098/rspb.2021.0552

Interactions between hosts and their resident microbial communities are a fundamental component of fitness for both agents. Though recent research has highlighted the importance of interactions between animals and their bacterial communities, compara... Read More about Fungal microbiomes are determined by host phylogeny and exhibit widespread associations with the bacterial microbiome.

Estuarine molecular bycatch as a landscape-wide biomonitoring tool (2021)
Journal Article
Mariani, S., Harper, L., Collins, R., Baillie, C., Wangensteen, O., McDevitt, A., …Genner, M. (2021). Estuarine molecular bycatch as a landscape-wide biomonitoring tool. Biological Conservation, 261, 109287. https://doi.org/10.1016/j.biocon.2021.109287

Environmental DNA analysis is rapidly transforming biodiversity monitoring and bolstering conservation applications worldwide. This approach has been assisted by the development of metabarcoding PCR primers that are suited for detection of a wide ran... Read More about Estuarine molecular bycatch as a landscape-wide biomonitoring tool.

Shark and ray trade in and out of Indonesia : addressing knowledge gaps on the path to sustainability (2021)
Journal Article
Prasetyo, A., McDevitt, A., Murray, J., Barry, J., Agung, F., Muttaqin, E., & Mariani, S. (2021). Shark and ray trade in and out of Indonesia : addressing knowledge gaps on the path to sustainability. Marine Policy, 133, 104714. https://doi.org/10.1016/j.marpol.2021.104714

Indonesian marine resources are among the richest on the planet, sustaining highly diverse fisheries. These fisheries include the largest shark and ray landings in the world, making Indonesia one of the world’s largest exporters of elasmobranch produ... Read More about Shark and ray trade in and out of Indonesia : addressing knowledge gaps on the path to sustainability.

Primer biases in the molecular assessment of diet in multiple insectivorous mammals (2021)
Journal Article
Browett, S., Curran, T., O’Meara, D., Harrington, A., Guimaraes Sales, N., Antwis, R., …McDevitt, A. (2021). Primer biases in the molecular assessment of diet in multiple insectivorous mammals. Mammalian Biology, 101(3), 293-304. https://doi.org/10.1007/s42991-021-00115-4

Our understanding of trophic interactions of small insectivorous mammals has been drastically improved with the advent of DNA metabarcoding. The technique has continued to be optimised over the years, with primer choice repeatedly being a vital facto... Read More about Primer biases in the molecular assessment of diet in multiple insectivorous mammals.

eDNA in a bottleneck : obstacles to fish metabarcoding studies in megadiverse freshwater systems (2021)
Journal Article
Jackman, J., Benvenuto, C., Coscia, I., Carvalho, C., Ready, J., Boubli, J., …Sales, N. (2021). eDNA in a bottleneck : obstacles to fish metabarcoding studies in megadiverse freshwater systems. Environmental DNA, 3(4), 837-849. https://doi.org/10.1002/edn3.191

The current capacity of environmental DNA (eDNA) to provide accurate insights into the biodiversity of megadiverse regions (e.g., the Neotropics) requires further evaluation to ensure its reliability for long‐term monitoring. In this study, we first... Read More about eDNA in a bottleneck : obstacles to fish metabarcoding studies in megadiverse freshwater systems.

Space-time dynamics in monitoring neotropical fish communities using eDNA metabarcoding (2020)
Journal Article
Sales, N., Wangensteen Fuentes, O., Carvalho, D., Deiner, K., Praebel, K., Coscia, I., …Mariani, S. (2021). Space-time dynamics in monitoring neotropical fish communities using eDNA metabarcoding. Science of the Total Environment, 754, 142096. https://doi.org/10.1016/j.scitotenv.2020.142096

The biodiverse Neotropical ecoregion remains insufficiently assessed, poorly managed, and threatened by unregulated human activities. Novel, rapid and cost-effective DNA-based approaches are valuable to improve understanding of the biological communi... Read More about Space-time dynamics in monitoring neotropical fish communities using eDNA metabarcoding.

Fishing for mammals : landscape-level monitoring of terrestrial and semi-aquatic communities using eDNA from riverine systems (2020)
Journal Article
Sales, N., McKenzie, M., Drake, J., Harper, L., Browett, S., Coscia, I., …McDevitt, A. (2020). Fishing for mammals : landscape-level monitoring of terrestrial and semi-aquatic communities using eDNA from riverine systems. Journal of Applied Ecology, 57(4), 707-716. https://doi.org/10.1111/1365-2664.13592

1. Environmental DNA (eDNA) metabarcoding has revolutionised biomonitoring in both marine and freshwater ecosystems. However, for semi-aquatic and terrestrial animals, the application of this technique remains relatively untested. 2. We first ass... Read More about Fishing for mammals : landscape-level monitoring of terrestrial and semi-aquatic communities using eDNA from riverine systems.

Genetic tools in the management of invasive mammals : recent trends and future perspectives (2020)
Journal Article
Browett, S., O'Meara, D., & McDevitt, A. (2020). Genetic tools in the management of invasive mammals : recent trends and future perspectives. Mammal Review, 50(2), 200-210. https://doi.org/10.1111/mam.12189

1. Invasive non-native species are now considered to be one of the greatest threats to biodiversity worldwide. Therefore, efficient and cost-effective management of species invasions requires robust knowledge of their demography, ecology and impacts,... Read More about Genetic tools in the management of invasive mammals : recent trends and future perspectives.

Phylogeographical structure of the pygmy shrew : revisiting the roles of southern and northern refugia in Europe (2020)
Journal Article
Vega, R., McDevitt, A., Stojak, J., Mishta, A., Wójcik, J., Kryštufek, B., & Searle, J. (2020). Phylogeographical structure of the pygmy shrew : revisiting the roles of southern and northern refugia in Europe. Biological Journal of the Linnean Society, 129(4), 901-917. https://doi.org/10.1093/biolinnean/blz209

Southern and northern glacial refugia are considered paradigms that explain the complex phylogeographical patterns and processes of European biota. Here, we provide a revisited statistical phylogeographical analysis of the pygmy shrew Sorex minutus L... Read More about Phylogeographical structure of the pygmy shrew : revisiting the roles of southern and northern refugia in Europe.

Fine-scale seascape genomics of an exploited marine species, the common cockle Cerastoderma edule, using a multi-modelling approach (2020)
Journal Article
Coscia, I., Wilmes, S., Ironside, J., Goward-Brown, A., O'Dea, E., Malham, S., …Robins, P. (2020). Fine-scale seascape genomics of an exploited marine species, the common cockle Cerastoderma edule, using a multi-modelling approach. Evolutionary Applications, 13(8), 1854-1867. https://doi.org/10.1111/eva.12932

Population dynamics of marine species that are sessile as adults are driven by oceanographic dispersal of larvae from spawning to nursery grounds. This is mediated by life-history traits such as the timing and frequency of spawning, larval behaviour... Read More about Fine-scale seascape genomics of an exploited marine species, the common cockle Cerastoderma edule, using a multi-modelling approach.

Assessing the potential of environmental DNA metabarcoding for monitoring Neotropical mammals : a case study in the Amazon and Atlantic Forest, Brazil (2020)
Journal Article
Sales, N., Da Cruz Kaizer, M., Coscia, I., Perkins, J., Highlands, A., Boubli, J., …McDevitt, A. (2020). Assessing the potential of environmental DNA metabarcoding for monitoring Neotropical mammals : a case study in the Amazon and Atlantic Forest, Brazil. Mammal Review, 50(3), 221-225. https://doi.org/10.1111/mam.12183

The application of environmental DNA (eDNA) metabarcoding as a biomonitoring tool has greatly increased in the last decade. However, most studies have focused on aquatic macro-organisms in temperate areas (e.g., fishes). We apply eDNA metabarcoding t... Read More about Assessing the potential of environmental DNA metabarcoding for monitoring Neotropical mammals : a case study in the Amazon and Atlantic Forest, Brazil.

Environmental DNA (eDNA) metabarcoding of pond water as a tool to survey conservation and management priority mammals (2019)
Journal Article
Harper, L., Lawson Handley, L., Carpenter, A., Ghazali, M., Di Muri, C., Macgregor, C., …Hänfling, B. (2019). Environmental DNA (eDNA) metabarcoding of pond water as a tool to survey conservation and management priority mammals. Biological Conservation, 238, 108225. https://doi.org/10.1016/j.biocon.2019.108225

Environmental DNA (eDNA) metabarcoding can identify terrestrial taxa utilising aquatic habitats alongside aquatic communities, but terrestrial species' eDNA dynamics are understudied. We evaluated eDNA metabarcoding for monitoring semi-aquatic and te... Read More about Environmental DNA (eDNA) metabarcoding of pond water as a tool to survey conservation and management priority mammals.

Environmental DNA metabarcoding as an effective and rapid tool for fish monitoring in canals (2019)
Journal Article
McDevitt, A., Sales, N., Browett, S., Sparnenn, A., Mariani, S., Wangensteen Fuentes, O., …Benvenuto, C. (2019). Environmental DNA metabarcoding as an effective and rapid tool for fish monitoring in canals. Journal of Fish Biology, 95(2), 679-682. https://doi.org/10.1111/jfb.14053

We focus on a case study along an English canal comparing environmental DNA (eDNA) metabarcoding with two types of electrofishing techniques (wade‐and‐reach and boom‐boat). In addition to corroborating data obtained by electrofishing, eDNA provided a... Read More about Environmental DNA metabarcoding as an effective and rapid tool for fish monitoring in canals.