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Prof Jean Boubli's Outputs (8)

Total evidence phylogeny of platyrrhine primates and a comparison of undated and tip-dating approaches (2022)
Journal Article
Beck, R., de Vries, D., Janiak, M., Goodhead, I., & Boubli, J. (2022). Total evidence phylogeny of platyrrhine primates and a comparison of undated and tip-dating approaches. Journal of Human Evolution, 174, https://doi.org/10.1016/j.jhevol.2022.103293

There have been multiple published phylogenetic analyses of platyrrhine primates (New World
monkeys) using both morphological and molecular data, but relatively few that have integrated
both types of data into a total evidence approach. Here, we pr... Read More about Total evidence phylogeny of platyrrhine primates and a comparison of undated and tip-dating approaches.

Two hundred and five newly assembled mitogenomes provide mixed evidence for rivers as drivers of speciation for Amazonian primates (2022)
Journal Article
Janiak, M. C., Silva, F. E., Beck, R. M. D., de Vries, D., Kuderna, L. F. K., Torosin, N. S., …Boubli, J. P. (2022). Two hundred and five newly assembled mitogenomes provide mixed evidence for rivers as drivers of speciation for Amazonian primates. Molecular Ecology, 31(14), 3888-3902. https://doi.org/10.1111/mec.16554

Mitochondrial DNA remains a cornerstone for molecular ecology, especially for study species from which high-quality tissue samples cannot be easily obtained. Methods using mitochondrial markers are usually reliant on reference databases, but these ar... Read More about Two hundred and five newly assembled mitogenomes provide mixed evidence for rivers as drivers of speciation for Amazonian primates.

Phylogenetics and an updated taxonomic status of the Tamarins (Callitrichinae, Cebidae) (2022)
Journal Article
Brcko, I., Carneiro, J., Ruiz-García, M., Boubli, J., Silva-Júnior, J., Farias, I., …Sampaio, I. (2022). Phylogenetics and an updated taxonomic status of the Tamarins (Callitrichinae, Cebidae). Molecular Phylogenetics and Evolution, 173, 107504. https://doi.org/10.1016/j.ympev.2022.107504

Traditionally, Saguinus has been organized into six taxonomic groups: bicolor, inustus, midas, mystax, nigricollis, and oedipus. After recent revisions, taxonomic reclassifications were proposed, including (1) the recognition of Leontocebus as a new... Read More about Phylogenetics and an updated taxonomic status of the Tamarins (Callitrichinae, Cebidae).

Molecular phylogeny and systematics of bald uakaris, genus Cacajao (Primates: Pitheciidae), with the description of a new species. (2022)
Journal Article
Ennes Silva, F., Valsecchi do Amaral, J., Roos, C., Bowler, M., Röhe, F., Sampaio, R., …Boubli, J. (2022). Molecular phylogeny and systematics of bald uakaris, genus Cacajao (Primates: Pitheciidae), with the description of a new species. Molecular Phylogenetics and Evolution, 173, https://doi.org/10.1016/j.ympev.2022.107509

Bald uakaris, genus Cacajao, are Amazonian primates currently classified as one species and four subspecies based on the patterns of pelage coloration. In this study, we test if their current taxonomy is represented by the phylogenetic relationship o... Read More about Molecular phylogeny and systematics of bald uakaris, genus Cacajao (Primates: Pitheciidae), with the description of a new species..

Amazonia camtrap: A dataset of mammal, bird, and reptile species recorded with camera traps in the Amazon forest. (2022)
Journal Article
Antunes, A., Montanarin, A., Gräbin, D., Monteiro, E., de Pinho, F., Alvarenga, G., …Ribeiro, M. (2022). Amazonia camtrap: A dataset of mammal, bird, and reptile species recorded with camera traps in the Amazon forest. Ecology, 103(9), e3738. https://doi.org/10.1002/ecy.3738

The Amazon forest has the highest biodiversity on earth. However, information on Amazonian vertebrate diversity is still deficient and scattered across the published, peer-reviewed and grey literature and in unpublished raw data. Camera traps are an... Read More about Amazonia camtrap: A dataset of mammal, bird, and reptile species recorded with camera traps in the Amazon forest..

Out of the shadows : multilocus systematics and biogeography of night monkeys suggest a Central Amazonian origin and a very recent widespread southeastward expansion in South America (2022)
Journal Article
Martins-Junior, A., Sampaio, I., Silva, A., Boubli, J., Hrbek, T., Farias, I., …Schneider, H. (2022). Out of the shadows : multilocus systematics and biogeography of night monkeys suggest a Central Amazonian origin and a very recent widespread southeastward expansion in South America. Molecular Phylogenetics and Evolution, 107426. https://doi.org/10.1016/j.ympev.2022.107426

Neotropical primates with a poorly understood taxonomy and biogeography. The number of species in the genus varies from one to nine, depending on the author, and there are at least 18 known karyotypes, varying from 2n = 46 to 2n = 58. Historically, n... Read More about Out of the shadows : multilocus systematics and biogeography of night monkeys suggest a Central Amazonian origin and a very recent widespread southeastward expansion in South America.